Innovations from the early user phase on the Jetstream Research Cloud
Richard Knepper, Jeremy Fischer, Craig Stewart, David Hancock, Matthew Link
DOI: http://dx.doi.org/10.15439/2016F523
Citation: Position Papers of the 2016 Federated Conference on Computer Science and Information Systems, M. Ganzha, L. Maciaszek, M. Paprzycki (eds). ACSIS, Vol. 9, pages 127–131 (2016)
Abstract. We describe the Jetstream cyberinfrastructure for research, a purpose-built system with the goal of supporting ``long-tail'' research by providing a flexible infrastructure that can provide academic cloud services. Jetstream offers a library of virtual machines and allows the user to create their own virtual machines in order to provide an open cloud for science that allows both on-demand and persistent instances. The system is currently in early-user mode and a number of partner institutions are already creating and using images in the system. This paper details some of the early work being done with the system to create high performance clusters in an on-demand fashion to support scientific work directly as well as serve as capability backend to scientific gateways such as CyVerse and Galaxy.
References
- Stewart, Craig A., et al. “Jetstream: A self-provisioned, scalable science and engineering cloud environment.” Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by Enhanced Cyberin- frastructure. 2015. ACM: St. Louis, MO, USA. p. 29-37.
- Moore, R.L., C. Baru, D. Baxter, G. Fox, A. Majumdar, P. Papadopoulos, W. Pfeiffer, R.S. Sinkovits, S. Strande, M. Tatineni, R. P. Wagner, N. Wilkins-Diehr, M.L. Norman. Gateways to Discovery: Cyberinfrastructure for the Long Tail of Science. In Proceedings of the 2014 Annual Conference on Extreme Science and Engineering Discovery Environment. 2014. ACM: Atlanta, GA, USA. p. 1-8.
- Texas Advanced Computing Center. Wrangler. https://www.tacc.utexas.edu/-/wrangler-data-intensive-system-opens-to-scientists
- Committee on Future Directions for NSF Advanced Computing Infrastructure to Support U.S. Science in 2017-2020. 2014. Future Directions for NSF Advanced Computing Infrastructure to Support U.S. Science and Engineering in 2017- 2020: Interim Report. Washington, DC. The National Academies Press. 48 pp. http://www.nap.edu/catalog/18972/future-directions-for-nsf-advanced-computing-infrastructure-to-support-us-science-and-engineering-in-2017-2020
- Goecks, J, A. Nekrutenko, J. Taylor, and The Galaxy Team. 2010. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11(8):R86. http://genomebiology.com/2010/11/8/R86
- Foster I, Kesselman C. Globus: A metacomputing infrastructure toolkit. International Journal of High Performance Computing Applications. 1997 Jun 1;11(2):115-28.
- Bobay J. Institutional Repositories: Why Go There?. Indiana Libraries. 2008 Jan 1;27(1):7-9
- Heidorn, P.B. Shedding Light on the Dark Data in the Long Tail of Science. Library Trends. 2008. 57(2), p. 280-299. http://muse.jhu.edu/journals/library trends/v057/57.2.heidorn.html
- Skidmore, E., S.-j. Kim, S. Kuchimanchi, S. Singaram, N. Merchant, and D. Stanzione. iPlant Atmosphere: A Gateway to Cloud Infrastructure for the Plant Sciences. In Proceedings of the 2011 ACM workshop on Gateway computing environments. 2011, ACM: Seattle, Washington, USA. p. 59-64. http://dl.acm.org/citation.cfm?id=2110495
- Marru S., Gunathilake L., Herath C., Tangchaisin P., Pierce M., Mattmann C., Singh R., Gunarathne T., Chinthaka E., Gardler R., Slominski A. Apache airavata: a framework for distributed applications and com- putational workflows. InProceedings of the 2011 ACM workshop on Gateway computing environments 2011 Nov 18 (pp. 21-28). ACM.